BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004A10SP1|AL425217
(872 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1702 1388 0.0
>3x_Contig1702
Length = 15454
Score = 1388 bits (696), Expect = 0.0
Identities = 706/714 (98%)
Strand = Plus / Plus
Query: 1 aaattagagatgatttgactcagactcaattgagaactaaattgattgaagcccataaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14741 aaattagagatgatttgactcagactcaattgagaactaaattgattgaagcccataaaa 14800
Query: 61 tcaccaacaagaaaaaccatgagttaggcttagttaagttatttgacgaattcgaagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14801 tcaccaacaagaaaaaccatgagttaggcttagttaagttatttgacgaattcgaagatg 14860
Query: 121 ttccycttgcaactattattggtatccgggggaaaaagagaaagaagttcagtgacggca 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14861 ttcctcttgcaactattattggtatccgggggaaaaagagaaagaagttcagtgacggca 14920
Query: 181 ttttaggatatgagacagacatgttaggagtgctacgccattcaaaaagaacaatgctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14921 ttttaggatatgagacagacatgttaggagtgctacgccattcaaaaagaacaatgctca 14980
Query: 241 aaaggctaagagagaaacgcggagtgcccmaccctgaagaagaaaacagcyctgctgtcc 300
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 14981 aaaggctaagagagaaacgcggagtgcccaaccctgaagaagaaaacagctctgctgtcc 15040
Query: 301 aagaagcaacgactgaaccaaaagtaatggctgaatccmctgcagaaactctggcggcag 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 15041 aagaagcaacgactgaaccaaaagtaatggctgaatccactgcagaaactctggcggcag 15100
Query: 361 atccaactgaaaaagtggaaaacgaaaggracggaactgccttccatgacagctgaatag 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 15101 atccaactgaaaaagtggaaaacgaaaggaacggaactgccttccatgacagctgaatag 15160
Query: 421 ttccaacttctgcgaacgatagttacactaataatgacattgtaattaaataattgtaga 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 15161 ttccaacttctgcgaacgatagtaacactaataatgacattgtaattaaataattgtaga 15220
Query: 481 tccatatttaatgactcctaattgaattccatactggtatataaggraatccaaaatttt 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 15221 tccatatttaatgactcctaattgaattccatactggtatataaggaaatccaaaatttt 15280
Query: 541 ctgtactttgttggtcagtatcaacgtttctgggtatggcgatggtaaattccmgtaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 15281 ctgtactttgttggtcagtatcaacgtttctgggtatggcgatggtaaattccagtaaca 15340
Query: 601 gtgaaaagaaacctctaaatcattaagagttatggtattgttagatgccctaatgaattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15341 gtgaaaagaaacctctaaatcattaagagttatggtattgttagatgccctaatgaattt 15400
Query: 661 acttgcctcgacgatctttgatatcatttgctcgtgaagttcctttatcctaag 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15401 acttgcctcgacgatctttgatatcatttgctcgtgaagttcctttatcctaag 15454
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6784
Number of Sequences: 1807
Number of extensions: 6784
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 872
length of database: 10,358,551
effective HSP length: 16
effective length of query: 856
effective length of database: 10,329,639
effective search space: 8842170984
effective search space used: 8842170984
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)